Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4633 |
| Number of amino acids: | 290 |
| Molecular Weight: | 33259.01 Da |
| Theoretical pI: | 6 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 9 | 3.1% |
| Cysteine CYS (C) | 4 | 1.38% |
| Glutamic Acid GLU (E) | 16 | 5.52% |
| Aspartic Acid ASP (D) | 15 | 5.17% |
| Glycine GLY (G) | 31 | 10.69% |
| Phynylalanine PHE (F) | 17 | 5.86% |
| Isoleucine ILE (I) | 13 | 4.48% |
| Histidine HIS (H) | 7 | 2.41% |
| Lysine LYS (K) | 12 | 4.14% |
| Methionine MET (M) | 6 | 2.07% |
| Leucine LEU (L) | 17 | 5.86% |
| Asparagine ASN (N) | 23 | 7.93% |
| Glutamine GLN (Q) | 9 | 3.1% |
| Proline PRO (P) | 10 | 3.45% |
| Serine SER (S) | 22 | 7.59% |
| Arginine ARG (R) | 15 | 5.17% |
| Threonine THR (T) | 15 | 5.17% |
| Tryptophan TRP (W) | 9 | 3.1% |
| Valine VAL (V) | 20 | 6.9% |
| Tyrosine TYR (Y) | 20 | 6.9% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1500 |
| Hydrogen | H | 2202 |
| Nitrogen | N | 402 |
| Oxygen | O | 442 |
| Sulphur | S | 10 |
| Formula | C1500H2202N402O442S10 |
| Total Number of Atoms: | 4556 |
| Total number of positively charged residues (ARG + LYS): | 27 |
| Total number of negatively charged residues (ASP + GLU): | 31 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 79550 Absorption 0.1% (=1 g/l) 2.392, assuming all pairs of CYS residues form cystines Ext. coefficient 79300 Absorption 0.1% (=1 g/l) 2.384, assuming all CYS residues are reduced |
| Aromaticity: | 0.159 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.20 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.10, 29.66, 16.55] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 63.4483 |
| Grand average of hydropathicity (GRAVY): | -0.54 |