Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4632 |
| Number of amino acids: | 329 |
| Molecular Weight: | 35156.49 Da |
| Theoretical pI: | 8.41 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 23 | 6.99% |
| Cysteine CYS (C) | 18 | 5.47% |
| Glutamic Acid GLU (E) | 5 | 1.52% |
| Aspartic Acid ASP (D) | 17 | 5.17% |
| Glycine GLY (G) | 46 | 13.98% |
| Phynylalanine PHE (F) | 16 | 4.86% |
| Isoleucine ILE (I) | 15 | 4.56% |
| Histidine HIS (H) | 4 | 1.22% |
| Lysine LYS (K) | 8 | 2.43% |
| Methionine MET (M) | 5 | 1.52% |
| Leucine LEU (L) | 22 | 6.69% |
| Asparagine ASN (N) | 17 | 5.17% |
| Glutamine GLN (Q) | 14 | 4.26% |
| Proline PRO (P) | 26 | 7.9% |
| Serine SER (S) | 29 | 8.81% |
| Arginine ARG (R) | 19 | 5.78% |
| Threonine THR (T) | 18 | 5.47% |
| Tryptophan TRP (W) | 8 | 2.43% |
| Valine VAL (V) | 8 | 2.43% |
| Tyrosine TYR (Y) | 11 | 3.34% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1539 |
| Hydrogen | H | 2331 |
| Nitrogen | N | 441 |
| Oxygen | O | 463 |
| Sulphur | S | 23 |
| Formula | C1539H2331N441O463S23 |
| Total Number of Atoms: | 4797 |
| Total number of positively charged residues (ARG + LYS): | 27 |
| Total number of negatively charged residues (ASP + GLU): | 22 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 61515 Absorption 0.1% (=1 g/l) 1.750, assuming all pairs of CYS residues form cystines Ext. coefficient 60390 Absorption 0.1% (=1 g/l) 1.718, assuming all CYS residues are reduced |
| Aromaticity: | 0.106 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.24 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.32, 35.87, 16.72] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 57.9027 |
| Grand average of hydropathicity (GRAVY): | -0.33 |