Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4631 |
| Number of amino acids: | 321 |
| Molecular Weight: | 33641.7 Da |
| Theoretical pI: | 8.29 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 39 | 12.15% |
| Cysteine CYS (C) | 17 | 5.3% |
| Glutamic Acid GLU (E) | 5 | 1.56% |
| Aspartic Acid ASP (D) | 15 | 4.67% |
| Glycine GLY (G) | 46 | 14.33% |
| Phynylalanine PHE (F) | 16 | 4.98% |
| Isoleucine ILE (I) | 9 | 2.8% |
| Histidine HIS (H) | 5 | 1.56% |
| Lysine LYS (K) | 7 | 2.18% |
| Methionine MET (M) | 6 | 1.87% |
| Leucine LEU (L) | 13 | 4.05% |
| Asparagine ASN (N) | 11 | 3.43% |
| Glutamine GLN (Q) | 13 | 4.05% |
| Proline PRO (P) | 19 | 5.92% |
| Serine SER (S) | 21 | 6.54% |
| Arginine ARG (R) | 17 | 5.3% |
| Threonine THR (T) | 25 | 7.79% |
| Tryptophan TRP (W) | 7 | 2.18% |
| Valine VAL (V) | 17 | 5.3% |
| Tyrosine TYR (Y) | 13 | 4.05% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1471 |
| Hydrogen | H | 2216 |
| Nitrogen | N | 420 |
| Oxygen | O | 445 |
| Sulphur | S | 23 |
| Formula | C1471H2216N420O445S23 |
| Total Number of Atoms: | 4575 |
| Total number of positively charged residues (ARG + LYS): | 24 |
| Total number of negatively charged residues (ASP + GLU): | 20 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 58870 Absorption 0.1% (=1 g/l) 1.750, assuming all pairs of CYS residues form cystines Ext. coefficient 57870 Absorption 0.1% (=1 g/l) 1.720, assuming all CYS residues are reduced |
| Aromaticity: | 0.112 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.02 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [23.36, 30.22, 19.63] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 54.2367 |
| Grand average of hydropathicity (GRAVY): | -0.15 |