Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4628 |
| Number of amino acids: | 266 |
| Molecular Weight: | 27930.67 Da |
| Theoretical pI: | 8.73 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 42 | 15.79% |
| Cysteine CYS (C) | 9 | 3.38% |
| Glutamic Acid GLU (E) | 3 | 1.13% |
| Aspartic Acid ASP (D) | 10 | 3.76% |
| Glycine GLY (G) | 35 | 13.16% |
| Phynylalanine PHE (F) | 10 | 3.76% |
| Isoleucine ILE (I) | 6 | 2.26% |
| Histidine HIS (H) | 3 | 1.13% |
| Lysine LYS (K) | 5 | 1.88% |
| Methionine MET (M) | 10 | 3.76% |
| Leucine LEU (L) | 15 | 5.64% |
| Asparagine ASN (N) | 8 | 3.01% |
| Glutamine GLN (Q) | 8 | 3.01% |
| Proline PRO (P) | 12 | 4.51% |
| Serine SER (S) | 15 | 5.64% |
| Arginine ARG (R) | 13 | 4.89% |
| Threonine THR (T) | 25 | 9.4% |
| Tryptophan TRP (W) | 9 | 3.38% |
| Valine VAL (V) | 15 | 5.64% |
| Tyrosine TYR (Y) | 13 | 4.89% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1238 |
| Hydrogen | H | 1869 |
| Nitrogen | N | 341 |
| Oxygen | O | 362 |
| Sulphur | S | 19 |
| Formula | C1238H1869N341O362S19 |
| Total Number of Atoms: | 3829 |
| Total number of positively charged residues (ARG + LYS): | 18 |
| Total number of negatively charged residues (ASP + GLU): | 13 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 69370 Absorption 0.1% (=1 g/l) 2.484, assuming all pairs of CYS residues form cystines Ext. coefficient 68870 Absorption 0.1% (=1 g/l) 2.466, assuming all CYS residues are reduced |
| Aromaticity: | 0.120 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 21.45 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.56, 26.32, 26.32] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 62.9324 |
| Grand average of hydropathicity (GRAVY): | 0.06 |