Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4627 |
| Number of amino acids: | 1143 |
| Molecular Weight: | 125675.78 Da |
| Theoretical pI: | 6.58 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 47 | 4.11% |
| Cysteine CYS (C) | 22 | 1.92% |
| Glutamic Acid GLU (E) | 67 | 5.86% |
| Aspartic Acid ASP (D) | 44 | 3.85% |
| Glycine GLY (G) | 90 | 7.87% |
| Phynylalanine PHE (F) | 48 | 4.2% |
| Isoleucine ILE (I) | 80 | 7% |
| Histidine HIS (H) | 18 | 1.57% |
| Lysine LYS (K) | 54 | 4.72% |
| Methionine MET (M) | 19 | 1.66% |
| Leucine LEU (L) | 158 | 13.82% |
| Asparagine ASN (N) | 77 | 6.74% |
| Glutamine GLN (Q) | 40 | 3.5% |
| Proline PRO (P) | 57 | 4.99% |
| Serine SER (S) | 129 | 11.29% |
| Arginine ARG (R) | 53 | 4.64% |
| Threonine THR (T) | 59 | 5.16% |
| Tryptophan TRP (W) | 11 | 0.96% |
| Valine VAL (V) | 48 | 4.2% |
| Tyrosine TYR (Y) | 22 | 1.92% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 5578 |
| Hydrogen | H | 8916 |
| Nitrogen | N | 1520 |
| Oxygen | O | 1693 |
| Sulphur | S | 41 |
| Formula | C5578H8916N1520O1693S41 |
| Total Number of Atoms: | 17748 |
| Total number of positively charged residues (ARG + LYS): | 107 |
| Total number of negatively charged residues (ASP + GLU): | 111 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 94655 Absorption 0.1% (=1 g/l) 0.753, assuming all pairs of CYS residues form cystines Ext. coefficient 93280 Absorption 0.1% (=1 g/l) 0.742, assuming all CYS residues are reduced |
| Aromaticity: | 0.071 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 39.33 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.11, 30.88, 25.46] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 97.498 |
| Grand average of hydropathicity (GRAVY): | -0.12 |