Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4622 |
| Number of amino acids: | 769 |
| Molecular Weight: | 85704.02 Da |
| Theoretical pI: | 5.65 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 33 | 4.29% |
| Cysteine CYS (C) | 30 | 3.9% |
| Glutamic Acid GLU (E) | 48 | 6.24% |
| Aspartic Acid ASP (D) | 42 | 5.46% |
| Glycine GLY (G) | 58 | 7.54% |
| Phynylalanine PHE (F) | 30 | 3.9% |
| Isoleucine ILE (I) | 56 | 7.28% |
| Histidine HIS (H) | 12 | 1.56% |
| Lysine LYS (K) | 36 | 4.68% |
| Methionine MET (M) | 14 | 1.82% |
| Leucine LEU (L) | 62 | 8.06% |
| Asparagine ASN (N) | 46 | 5.98% |
| Glutamine GLN (Q) | 18 | 2.34% |
| Proline PRO (P) | 22 | 2.86% |
| Serine SER (S) | 75 | 9.75% |
| Arginine ARG (R) | 42 | 5.46% |
| Threonine THR (T) | 52 | 6.76% |
| Tryptophan TRP (W) | 4 | 0.52% |
| Valine VAL (V) | 51 | 6.63% |
| Tyrosine TYR (Y) | 38 | 4.94% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3759 |
| Hydrogen | H | 5905 |
| Nitrogen | N | 1023 |
| Oxygen | O | 1179 |
| Sulphur | S | 44 |
| Formula | C3759H5905N1023O1179S44 |
| Total Number of Atoms: | 11910 |
| Total number of positively charged residues (ARG + LYS): | 78 |
| Total number of negatively charged residues (ASP + GLU): | 90 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 80495 Absorption 0.1% (=1 g/l) 0.939, assuming all pairs of CYS residues form cystines Ext. coefficient 78620 Absorption 0.1% (=1 g/l) 0.917, assuming all CYS residues are reduced |
| Aromaticity: | 0.094 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 34.51 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.34, 26.14, 20.42] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.368 |
| Grand average of hydropathicity (GRAVY): | -0.22 |