Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4621 |
| Number of amino acids: | 326 |
| Molecular Weight: | 36253.4 Da |
| Theoretical pI: | 6.36 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 25 | 7.67% |
| Cysteine CYS (C) | 10 | 3.07% |
| Glutamic Acid GLU (E) | 17 | 5.21% |
| Aspartic Acid ASP (D) | 24 | 7.36% |
| Glycine GLY (G) | 19 | 5.83% |
| Phynylalanine PHE (F) | 18 | 5.52% |
| Isoleucine ILE (I) | 16 | 4.91% |
| Histidine HIS (H) | 6 | 1.84% |
| Lysine LYS (K) | 22 | 6.75% |
| Methionine MET (M) | 11 | 3.37% |
| Leucine LEU (L) | 26 | 7.98% |
| Asparagine ASN (N) | 17 | 5.21% |
| Glutamine GLN (Q) | 8 | 2.45% |
| Proline PRO (P) | 11 | 3.37% |
| Serine SER (S) | 25 | 7.67% |
| Arginine ARG (R) | 17 | 5.21% |
| Threonine THR (T) | 20 | 6.13% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 24 | 7.36% |
| Tyrosine TYR (Y) | 10 | 3.07% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1591 |
| Hydrogen | H | 2520 |
| Nitrogen | N | 436 |
| Oxygen | O | 489 |
| Sulphur | S | 21 |
| Formula | C1591H2520N436O489S21 |
| Total Number of Atoms: | 5057 |
| Total number of positively charged residues (ARG + LYS): | 39 |
| Total number of negatively charged residues (ASP + GLU): | 41 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 15525 Absorption 0.1% (=1 g/l) 0.428, assuming all pairs of CYS residues form cystines Ext. coefficient 14900 Absorption 0.1% (=1 g/l) 0.411, assuming all CYS residues are reduced |
| Aromaticity: | 0.086 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.24 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.83, 22.09, 24.23] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.2638 |
| Grand average of hydropathicity (GRAVY): | -0.22 |