Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4619 |
| Number of amino acids: | 669 |
| Molecular Weight: | 74006.2 Da |
| Theoretical pI: | 8.2 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 39 | 5.83% |
| Cysteine CYS (C) | 12 | 1.79% |
| Glutamic Acid GLU (E) | 37 | 5.53% |
| Aspartic Acid ASP (D) | 27 | 4.04% |
| Glycine GLY (G) | 43 | 6.43% |
| Phynylalanine PHE (F) | 35 | 5.23% |
| Isoleucine ILE (I) | 31 | 4.63% |
| Histidine HIS (H) | 12 | 1.79% |
| Lysine LYS (K) | 26 | 3.89% |
| Methionine MET (M) | 14 | 2.09% |
| Leucine LEU (L) | 79 | 11.81% |
| Asparagine ASN (N) | 39 | 5.83% |
| Glutamine GLN (Q) | 28 | 4.19% |
| Proline PRO (P) | 33 | 4.93% |
| Serine SER (S) | 77 | 11.51% |
| Arginine ARG (R) | 41 | 6.13% |
| Threonine THR (T) | 37 | 5.53% |
| Tryptophan TRP (W) | 3 | 0.45% |
| Valine VAL (V) | 40 | 5.98% |
| Tyrosine TYR (Y) | 16 | 2.39% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3268 |
| Hydrogen | H | 5186 |
| Nitrogen | N | 912 |
| Oxygen | O | 995 |
| Sulphur | S | 26 |
| Formula | C3268H5186N912O995S26 |
| Total Number of Atoms: | 10387 |
| Total number of positively charged residues (ARG + LYS): | 67 |
| Total number of negatively charged residues (ASP + GLU): | 64 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 41090 Absorption 0.1% (=1 g/l) 0.555, assuming all pairs of CYS residues form cystines Ext. coefficient 40340 Absorption 0.1% (=1 g/l) 0.545, assuming all CYS residues are reduced |
| Aromaticity: | 0.081 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 46.46 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.49, 28.70, 25.26] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 87.2946 |
| Grand average of hydropathicity (GRAVY): | -0.20 |