Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4618 |
| Number of amino acids: | 467 |
| Molecular Weight: | 50775.81 Da |
| Theoretical pI: | 5.41 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 28 | 6% |
| Cysteine CYS (C) | 16 | 3.43% |
| Glutamic Acid GLU (E) | 25 | 5.35% |
| Aspartic Acid ASP (D) | 31 | 6.64% |
| Glycine GLY (G) | 43 | 9.21% |
| Phynylalanine PHE (F) | 16 | 3.43% |
| Isoleucine ILE (I) | 33 | 7.07% |
| Histidine HIS (H) | 13 | 2.78% |
| Lysine LYS (K) | 28 | 6% |
| Methionine MET (M) | 6 | 1.28% |
| Leucine LEU (L) | 23 | 4.93% |
| Asparagine ASN (N) | 32 | 6.85% |
| Glutamine GLN (Q) | 19 | 4.07% |
| Proline PRO (P) | 16 | 3.43% |
| Serine SER (S) | 40 | 8.57% |
| Arginine ARG (R) | 14 | 3% |
| Threonine THR (T) | 25 | 5.35% |
| Tryptophan TRP (W) | 5 | 1.07% |
| Valine VAL (V) | 40 | 8.57% |
| Tyrosine TYR (Y) | 14 | 3% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2211 |
| Hydrogen | H | 3457 |
| Nitrogen | N | 619 |
| Oxygen | O | 710 |
| Sulphur | S | 22 |
| Formula | C2211H3457N619O710S22 |
| Total Number of Atoms: | 7019 |
| Total number of positively charged residues (ARG + LYS): | 42 |
| Total number of negatively charged residues (ASP + GLU): | 56 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 49360 Absorption 0.1% (=1 g/l) 0.972, assuming all pairs of CYS residues form cystines Ext. coefficient 48360 Absorption 0.1% (=1 g/l) 0.952, assuming all CYS residues are reduced |
| Aromaticity: | 0.075 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 34.56 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.05, 28.05, 17.56] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 77.6017 |
| Grand average of hydropathicity (GRAVY): | -0.33 |