Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4617 |
| Number of amino acids: | 316 |
| Molecular Weight: | 33517.8 Da |
| Theoretical pI: | 8.1 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 10.13% |
| Cysteine CYS (C) | 9 | 2.85% |
| Glutamic Acid GLU (E) | 6 | 1.9% |
| Aspartic Acid ASP (D) | 17 | 5.38% |
| Glycine GLY (G) | 23 | 7.28% |
| Phynylalanine PHE (F) | 17 | 5.38% |
| Isoleucine ILE (I) | 15 | 4.75% |
| Histidine HIS (H) | 4 | 1.27% |
| Lysine LYS (K) | 14 | 4.43% |
| Methionine MET (M) | 5 | 1.58% |
| Leucine LEU (L) | 30 | 9.49% |
| Asparagine ASN (N) | 26 | 8.23% |
| Glutamine GLN (Q) | 10 | 3.16% |
| Proline PRO (P) | 11 | 3.48% |
| Serine SER (S) | 35 | 11.08% |
| Arginine ARG (R) | 11 | 3.48% |
| Threonine THR (T) | 26 | 8.23% |
| Tryptophan TRP (W) | 1 | 0.32% |
| Valine VAL (V) | 18 | 5.7% |
| Tyrosine TYR (Y) | 6 | 1.9% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1462 |
| Hydrogen | H | 2320 |
| Nitrogen | N | 408 |
| Oxygen | O | 466 |
| Sulphur | S | 14 |
| Formula | C1462H2320N408O466S14 |
| Total Number of Atoms: | 4670 |
| Total number of positively charged residues (ARG + LYS): | 25 |
| Total number of negatively charged residues (ASP + GLU): | 23 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 14940 Absorption 0.1% (=1 g/l) 0.446, assuming all pairs of CYS residues form cystines Ext. coefficient 14440 Absorption 0.1% (=1 g/l) 0.431, assuming all CYS residues are reduced |
| Aromaticity: | 0.076 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 30.49 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.53, 30.06, 23.10] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.1836 |
| Grand average of hydropathicity (GRAVY): | -0.03 |