Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4616 |
| Number of amino acids: | 571 |
| Molecular Weight: | 66989.84 Da |
| Theoretical pI: | 6.31 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 21 | 3.68% |
| Cysteine CYS (C) | 2 | 0.35% |
| Glutamic Acid GLU (E) | 80 | 14.01% |
| Aspartic Acid ASP (D) | 23 | 4.03% |
| Glycine GLY (G) | 28 | 4.9% |
| Phynylalanine PHE (F) | 23 | 4.03% |
| Isoleucine ILE (I) | 26 | 4.55% |
| Histidine HIS (H) | 12 | 2.1% |
| Lysine LYS (K) | 44 | 7.71% |
| Methionine MET (M) | 2 | 0.35% |
| Leucine LEU (L) | 54 | 9.46% |
| Asparagine ASN (N) | 36 | 6.3% |
| Glutamine GLN (Q) | 33 | 5.78% |
| Proline PRO (P) | 26 | 4.55% |
| Serine SER (S) | 42 | 7.36% |
| Arginine ARG (R) | 54 | 9.46% |
| Threonine THR (T) | 16 | 2.8% |
| Tryptophan TRP (W) | 3 | 0.53% |
| Valine VAL (V) | 30 | 5.25% |
| Tyrosine TYR (Y) | 16 | 2.8% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2930 |
| Hydrogen | H | 4669 |
| Nitrogen | N | 873 |
| Oxygen | O | 921 |
| Sulphur | S | 4 |
| Formula | C2930H4669N873O921S4 |
| Total Number of Atoms: | 9397 |
| Total number of positively charged residues (ARG + LYS): | 98 |
| Total number of negatively charged residues (ASP + GLU): | 103 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 40465 Absorption 0.1% (=1 g/l) 0.604, assuming all pairs of CYS residues form cystines Ext. coefficient 40340 Absorption 0.1% (=1 g/l) 0.602, assuming all CYS residues are reduced |
| Aromaticity: | 0.074 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 63.41 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.62, 23.12, 27.50] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 73.5552 |
| Grand average of hydropathicity (GRAVY): | -1.08 |