Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4609 |
| Number of amino acids: | 642 |
| Molecular Weight: | 70744.95 Da |
| Theoretical pI: | 8.6 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 24 | 3.74% |
| Cysteine CYS (C) | 26 | 4.05% |
| Glutamic Acid GLU (E) | 38 | 5.92% |
| Aspartic Acid ASP (D) | 22 | 3.43% |
| Glycine GLY (G) | 58 | 9.03% |
| Phynylalanine PHE (F) | 22 | 3.43% |
| Isoleucine ILE (I) | 41 | 6.39% |
| Histidine HIS (H) | 11 | 1.71% |
| Lysine LYS (K) | 41 | 6.39% |
| Methionine MET (M) | 15 | 2.34% |
| Leucine LEU (L) | 53 | 8.26% |
| Asparagine ASN (N) | 36 | 5.61% |
| Glutamine GLN (Q) | 14 | 2.18% |
| Proline PRO (P) | 25 | 3.89% |
| Serine SER (S) | 66 | 10.28% |
| Arginine ARG (R) | 30 | 4.67% |
| Threonine THR (T) | 41 | 6.39% |
| Tryptophan TRP (W) | 3 | 0.47% |
| Valine VAL (V) | 45 | 7.01% |
| Tyrosine TYR (Y) | 31 | 4.83% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3111 |
| Hydrogen | H | 4932 |
| Nitrogen | N | 848 |
| Oxygen | O | 951 |
| Sulphur | S | 41 |
| Formula | C3111H4932N848O951S41 |
| Total Number of Atoms: | 9883 |
| Total number of positively charged residues (ARG + LYS): | 71 |
| Total number of negatively charged residues (ASP + GLU): | 60 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 64315 Absorption 0.1% (=1 g/l) 0.909, assuming all pairs of CYS residues form cystines Ext. coefficient 62690 Absorption 0.1% (=1 g/l) 0.886, assuming all CYS residues are reduced |
| Aromaticity: | 0.087 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.46 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.37, 28.82, 20.25] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 81.1682 |
| Grand average of hydropathicity (GRAVY): | -0.20 |