Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4605 |
| Number of amino acids: | 339 |
| Molecular Weight: | 36994.71 Da |
| Theoretical pI: | 5.22 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 29 | 8.55% |
| Cysteine CYS (C) | 2 | 0.59% |
| Glutamic Acid GLU (E) | 16 | 4.72% |
| Aspartic Acid ASP (D) | 17 | 5.01% |
| Glycine GLY (G) | 24 | 7.08% |
| Phynylalanine PHE (F) | 13 | 3.83% |
| Isoleucine ILE (I) | 21 | 6.19% |
| Histidine HIS (H) | 3 | 0.88% |
| Lysine LYS (K) | 11 | 3.24% |
| Methionine MET (M) | 5 | 1.47% |
| Leucine LEU (L) | 34 | 10.03% |
| Asparagine ASN (N) | 33 | 9.73% |
| Glutamine GLN (Q) | 12 | 3.54% |
| Proline PRO (P) | 19 | 5.6% |
| Serine SER (S) | 26 | 7.67% |
| Arginine ARG (R) | 16 | 4.72% |
| Threonine THR (T) | 18 | 5.31% |
| Tryptophan TRP (W) | 2 | 0.59% |
| Valine VAL (V) | 25 | 7.37% |
| Tyrosine TYR (Y) | 13 | 3.83% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1642 |
| Hydrogen | H | 2583 |
| Nitrogen | N | 451 |
| Oxygen | O | 508 |
| Sulphur | S | 7 |
| Formula | C1642H2583N451O508S7 |
| Total Number of Atoms: | 5191 |
| Total number of positively charged residues (ARG + LYS): | 27 |
| Total number of negatively charged residues (ASP + GLU): | 33 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 30495 Absorption 0.1% (=1 g/l) 0.824, assuming all pairs of CYS residues form cystines Ext. coefficient 30370 Absorption 0.1% (=1 g/l) 0.821, assuming all CYS residues are reduced |
| Aromaticity: | 0.083 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.23 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.86, 30.09, 24.78] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 93.2153 |
| Grand average of hydropathicity (GRAVY): | -0.17 |