Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4600 |
| Number of amino acids: | 436 |
| Molecular Weight: | 49779.37 Da |
| Theoretical pI: | 8.61 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 15 | 3.44% |
| Cysteine CYS (C) | 13 | 2.98% |
| Glutamic Acid GLU (E) | 16 | 3.67% |
| Aspartic Acid ASP (D) | 23 | 5.28% |
| Glycine GLY (G) | 31 | 7.11% |
| Phynylalanine PHE (F) | 22 | 5.05% |
| Isoleucine ILE (I) | 19 | 4.36% |
| Histidine HIS (H) | 4 | 0.92% |
| Lysine LYS (K) | 14 | 3.21% |
| Methionine MET (M) | 11 | 2.52% |
| Leucine LEU (L) | 42 | 9.63% |
| Asparagine ASN (N) | 35 | 8.03% |
| Glutamine GLN (Q) | 9 | 2.06% |
| Proline PRO (P) | 19 | 4.36% |
| Serine SER (S) | 44 | 10.09% |
| Arginine ARG (R) | 31 | 7.11% |
| Threonine THR (T) | 29 | 6.65% |
| Tryptophan TRP (W) | 14 | 3.21% |
| Valine VAL (V) | 25 | 5.73% |
| Tyrosine TYR (Y) | 20 | 4.59% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2218 |
| Hydrogen | H | 3381 |
| Nitrogen | N | 609 |
| Oxygen | O | 652 |
| Sulphur | S | 24 |
| Formula | C2218H3381N609O652S24 |
| Total Number of Atoms: | 6884 |
| Total number of positively charged residues (ARG + LYS): | 45 |
| Total number of negatively charged residues (ASP + GLU): | 39 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 107550 Absorption 0.1% (=1 g/l) 2.161, assuming all pairs of CYS residues form cystines Ext. coefficient 106800 Absorption 0.1% (=1 g/l) 2.145, assuming all CYS residues are reduced |
| Aromaticity: | 0.128 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.22 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.57, 29.59, 19.27] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 74.633 |
| Grand average of hydropathicity (GRAVY): | -0.33 |