Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4597 |
| Number of amino acids: | 565 |
| Molecular Weight: | 64518.13 Da |
| Theoretical pI: | 5.69 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 26 | 4.6% |
| Cysteine CYS (C) | 6 | 1.06% |
| Glutamic Acid GLU (E) | 53 | 9.38% |
| Aspartic Acid ASP (D) | 35 | 6.19% |
| Glycine GLY (G) | 41 | 7.26% |
| Phynylalanine PHE (F) | 28 | 4.96% |
| Isoleucine ILE (I) | 23 | 4.07% |
| Histidine HIS (H) | 8 | 1.42% |
| Lysine LYS (K) | 16 | 2.83% |
| Methionine MET (M) | 2 | 0.35% |
| Leucine LEU (L) | 40 | 7.08% |
| Asparagine ASN (N) | 28 | 4.96% |
| Glutamine GLN (Q) | 48 | 8.5% |
| Proline PRO (P) | 21 | 3.72% |
| Serine SER (S) | 53 | 9.38% |
| Arginine ARG (R) | 63 | 11.15% |
| Threonine THR (T) | 20 | 3.54% |
| Tryptophan TRP (W) | 5 | 0.88% |
| Valine VAL (V) | 41 | 7.26% |
| Tyrosine TYR (Y) | 8 | 1.42% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2773 |
| Hydrogen | H | 4393 |
| Nitrogen | N | 867 |
| Oxygen | O | 899 |
| Sulphur | S | 8 |
| Formula | C2773H4393N867O899S8 |
| Total Number of Atoms: | 8940 |
| Total number of positively charged residues (ARG + LYS): | 79 |
| Total number of negatively charged residues (ASP + GLU): | 88 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 39795 Absorption 0.1% (=1 g/l) 0.617, assuming all pairs of CYS residues form cystines Ext. coefficient 39420 Absorption 0.1% (=1 g/l) 0.611, assuming all CYS residues are reduced |
| Aromaticity: | 0.073 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 63.27 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.66, 25.31, 21.42] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 69.1328 |
| Grand average of hydropathicity (GRAVY): | -0.88 |