Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4589 |
| Number of amino acids: | 312 |
| Molecular Weight: | 34153.61 Da |
| Theoretical pI: | 7.04 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 25 | 8.01% |
| Cysteine CYS (C) | 4 | 1.28% |
| Glutamic Acid GLU (E) | 16 | 5.13% |
| Aspartic Acid ASP (D) | 16 | 5.13% |
| Glycine GLY (G) | 21 | 6.73% |
| Phynylalanine PHE (F) | 18 | 5.77% |
| Isoleucine ILE (I) | 13 | 4.17% |
| Histidine HIS (H) | 3 | 0.96% |
| Lysine LYS (K) | 22 | 7.05% |
| Methionine MET (M) | 6 | 1.92% |
| Leucine LEU (L) | 25 | 8.01% |
| Asparagine ASN (N) | 20 | 6.41% |
| Glutamine GLN (Q) | 7 | 2.24% |
| Proline PRO (P) | 14 | 4.49% |
| Serine SER (S) | 36 | 11.54% |
| Arginine ARG (R) | 10 | 3.21% |
| Threonine THR (T) | 17 | 5.45% |
| Tryptophan TRP (W) | 4 | 1.28% |
| Valine VAL (V) | 24 | 7.69% |
| Tyrosine TYR (Y) | 11 | 3.53% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1527 |
| Hydrogen | H | 2369 |
| Nitrogen | N | 401 |
| Oxygen | O | 468 |
| Sulphur | S | 10 |
| Formula | C1527H2369N401O468S10 |
| Total Number of Atoms: | 4775 |
| Total number of positively charged residues (ARG + LYS): | 32 |
| Total number of negatively charged residues (ASP + GLU): | 32 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 38640 Absorption 0.1% (=1 g/l) 1.131, assuming all pairs of CYS residues form cystines Ext. coefficient 38390 Absorption 0.1% (=1 g/l) 1.124, assuming all CYS residues are reduced |
| Aromaticity: | 0.106 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.97 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.45, 29.17, 23.08] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 77.8205 |
| Grand average of hydropathicity (GRAVY): | -0.21 |