Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4587 |
| Number of amino acids: | 596 |
| Molecular Weight: | 64743.38 Da |
| Theoretical pI: | 5.14 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 64 | 10.74% |
| Cysteine CYS (C) | 8 | 1.34% |
| Glutamic Acid GLU (E) | 27 | 4.53% |
| Aspartic Acid ASP (D) | 50 | 8.39% |
| Glycine GLY (G) | 60 | 10.07% |
| Phynylalanine PHE (F) | 22 | 3.69% |
| Isoleucine ILE (I) | 18 | 3.02% |
| Histidine HIS (H) | 19 | 3.19% |
| Lysine LYS (K) | 13 | 2.18% |
| Methionine MET (M) | 9 | 1.51% |
| Leucine LEU (L) | 49 | 8.22% |
| Asparagine ASN (N) | 21 | 3.52% |
| Glutamine GLN (Q) | 11 | 1.85% |
| Proline PRO (P) | 35 | 5.87% |
| Serine SER (S) | 40 | 6.71% |
| Arginine ARG (R) | 39 | 6.54% |
| Threonine THR (T) | 23 | 3.86% |
| Tryptophan TRP (W) | 15 | 2.52% |
| Valine VAL (V) | 53 | 8.89% |
| Tyrosine TYR (Y) | 20 | 3.36% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2878 |
| Hydrogen | H | 4381 |
| Nitrogen | N | 811 |
| Oxygen | O | 866 |
| Sulphur | S | 17 |
| Formula | C2878H4381N811O866S17 |
| Total Number of Atoms: | 8953 |
| Total number of positively charged residues (ARG + LYS): | 52 |
| Total number of negatively charged residues (ASP + GLU): | 77 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 112800 Absorption 0.1% (=1 g/l) 1.742, assuming all pairs of CYS residues form cystines Ext. coefficient 112300 Absorption 0.1% (=1 g/l) 1.735, assuming all CYS residues are reduced |
| Aromaticity: | 0.096 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.97 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.70, 26.17, 25.00] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 80.3692 |
| Grand average of hydropathicity (GRAVY): | -0.22 |