Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4581 |
| Number of amino acids: | 328 |
| Molecular Weight: | 34889.59 Da |
| Theoretical pI: | 8.61 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 27 | 8.23% |
| Cysteine CYS (C) | 10 | 3.05% |
| Glutamic Acid GLU (E) | 6 | 1.83% |
| Aspartic Acid ASP (D) | 17 | 5.18% |
| Glycine GLY (G) | 34 | 10.37% |
| Phynylalanine PHE (F) | 12 | 3.66% |
| Isoleucine ILE (I) | 17 | 5.18% |
| Histidine HIS (H) | 4 | 1.22% |
| Lysine LYS (K) | 2 | 0.61% |
| Methionine MET (M) | 5 | 1.52% |
| Leucine LEU (L) | 29 | 8.84% |
| Asparagine ASN (N) | 20 | 6.1% |
| Glutamine GLN (Q) | 18 | 5.49% |
| Proline PRO (P) | 16 | 4.88% |
| Serine SER (S) | 22 | 6.71% |
| Arginine ARG (R) | 25 | 7.62% |
| Threonine THR (T) | 29 | 8.84% |
| Tryptophan TRP (W) | 3 | 0.91% |
| Valine VAL (V) | 29 | 8.84% |
| Tyrosine TYR (Y) | 3 | 0.91% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1509 |
| Hydrogen | H | 2434 |
| Nitrogen | N | 454 |
| Oxygen | O | 467 |
| Sulphur | S | 15 |
| Formula | C1509H2434N454O467S15 |
| Total Number of Atoms: | 4879 |
| Total number of positively charged residues (ARG + LYS): | 27 |
| Total number of negatively charged residues (ASP + GLU): | 23 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 21595 Absorption 0.1% (=1 g/l) 0.619, assuming all pairs of CYS residues form cystines Ext. coefficient 20970 Absorption 0.1% (=1 g/l) 0.601, assuming all CYS residues are reduced |
| Aromaticity: | 0.055 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.58 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.35, 28.05, 20.43] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 88.5671 |
| Grand average of hydropathicity (GRAVY): | -0.02 |