Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4580 |
| Number of amino acids: | 695 |
| Molecular Weight: | 75225.05 Da |
| Theoretical pI: | 5.28 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 38 | 5.47% |
| Cysteine CYS (C) | 28 | 4.03% |
| Glutamic Acid GLU (E) | 25 | 3.6% |
| Aspartic Acid ASP (D) | 44 | 6.33% |
| Glycine GLY (G) | 60 | 8.63% |
| Phynylalanine PHE (F) | 42 | 6.04% |
| Isoleucine ILE (I) | 25 | 3.6% |
| Histidine HIS (H) | 10 | 1.44% |
| Lysine LYS (K) | 33 | 4.75% |
| Methionine MET (M) | 17 | 2.45% |
| Leucine LEU (L) | 49 | 7.05% |
| Asparagine ASN (N) | 43 | 6.19% |
| Glutamine GLN (Q) | 17 | 2.45% |
| Proline PRO (P) | 44 | 6.33% |
| Serine SER (S) | 97 | 13.96% |
| Arginine ARG (R) | 22 | 3.17% |
| Threonine THR (T) | 36 | 5.18% |
| Tryptophan TRP (W) | 9 | 1.29% |
| Valine VAL (V) | 34 | 4.89% |
| Tyrosine TYR (Y) | 22 | 3.17% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3295 |
| Hydrogen | H | 5015 |
| Nitrogen | N | 883 |
| Oxygen | O | 1049 |
| Sulphur | S | 45 |
| Formula | C3295H5015N883O1049S45 |
| Total Number of Atoms: | 10287 |
| Total number of positively charged residues (ARG + LYS): | 55 |
| Total number of negatively charged residues (ASP + GLU): | 69 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 84030 Absorption 0.1% (=1 g/l) 1.117, assuming all pairs of CYS residues form cystines Ext. coefficient 82280 Absorption 0.1% (=1 g/l) 1.094, assuming all CYS residues are reduced |
| Aromaticity: | 0.105 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.66 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.04, 35.11, 18.56] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 61.1799 |
| Grand average of hydropathicity (GRAVY): | -0.31 |