Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4579 |
| Number of amino acids: | 788 |
| Molecular Weight: | 87391.38 Da |
| Theoretical pI: | 7.84 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 31 | 3.93% |
| Cysteine CYS (C) | 30 | 3.81% |
| Glutamic Acid GLU (E) | 43 | 5.46% |
| Aspartic Acid ASP (D) | 43 | 5.46% |
| Glycine GLY (G) | 59 | 7.49% |
| Phynylalanine PHE (F) | 32 | 4.06% |
| Isoleucine ILE (I) | 54 | 6.85% |
| Histidine HIS (H) | 11 | 1.4% |
| Lysine LYS (K) | 53 | 6.73% |
| Methionine MET (M) | 13 | 1.65% |
| Leucine LEU (L) | 61 | 7.74% |
| Asparagine ASN (N) | 55 | 6.98% |
| Glutamine GLN (Q) | 19 | 2.41% |
| Proline PRO (P) | 29 | 3.68% |
| Serine SER (S) | 78 | 9.9% |
| Arginine ARG (R) | 36 | 4.57% |
| Threonine THR (T) | 47 | 5.96% |
| Tryptophan TRP (W) | 7 | 0.89% |
| Valine VAL (V) | 58 | 7.36% |
| Tyrosine TYR (Y) | 29 | 3.68% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3841 |
| Hydrogen | H | 6072 |
| Nitrogen | N | 1052 |
| Oxygen | O | 1189 |
| Sulphur | S | 43 |
| Formula | C3841H6072N1052O1189S43 |
| Total Number of Atoms: | 12197 |
| Total number of positively charged residues (ARG + LYS): | 89 |
| Total number of negatively charged residues (ASP + GLU): | 86 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 83585 Absorption 0.1% (=1 g/l) 0.956, assuming all pairs of CYS residues form cystines Ext. coefficient 81710 Absorption 0.1% (=1 g/l) 0.935, assuming all CYS residues are reduced |
| Aromaticity: | 0.086 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 46.70 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.58, 28.05, 18.78] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.1954 |
| Grand average of hydropathicity (GRAVY): | -0.27 |