Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4574 |
| Number of amino acids: | 894 |
| Molecular Weight: | 98320.17 Da |
| Theoretical pI: | 7.83 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 50 | 5.59% |
| Cysteine CYS (C) | 6 | 0.67% |
| Glutamic Acid GLU (E) | 50 | 5.59% |
| Aspartic Acid ASP (D) | 46 | 5.15% |
| Glycine GLY (G) | 40 | 4.47% |
| Phynylalanine PHE (F) | 45 | 5.03% |
| Isoleucine ILE (I) | 39 | 4.36% |
| Histidine HIS (H) | 31 | 3.47% |
| Lysine LYS (K) | 58 | 6.49% |
| Methionine MET (M) | 15 | 1.68% |
| Leucine LEU (L) | 81 | 9.06% |
| Asparagine ASN (N) | 44 | 4.92% |
| Glutamine GLN (Q) | 34 | 3.8% |
| Proline PRO (P) | 92 | 10.29% |
| Serine SER (S) | 107 | 11.97% |
| Arginine ARG (R) | 39 | 4.36% |
| Threonine THR (T) | 55 | 6.15% |
| Tryptophan TRP (W) | 2 | 0.22% |
| Valine VAL (V) | 50 | 5.59% |
| Tyrosine TYR (Y) | 10 | 1.12% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4359 |
| Hydrogen | H | 6883 |
| Nitrogen | N | 1211 |
| Oxygen | O | 1337 |
| Sulphur | S | 21 |
| Formula | C4359H6883N1211O1337S21 |
| Total Number of Atoms: | 13811 |
| Total number of positively charged residues (ARG + LYS): | 97 |
| Total number of negatively charged residues (ASP + GLU): | 96 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 26275 Absorption 0.1% (=1 g/l) 0.267, assuming all pairs of CYS residues form cystines Ext. coefficient 25900 Absorption 0.1% (=1 g/l) 0.263, assuming all CYS residues are reduced |
| Aromaticity: | 0.064 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 61.09 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.39, 31.66, 21.92] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 74.1611 |
| Grand average of hydropathicity (GRAVY): | -0.51 |