Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4573 |
| Number of amino acids: | 532 |
| Molecular Weight: | 58570.51 Da |
| Theoretical pI: | 6.58 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 73 | 13.72% |
| Cysteine CYS (C) | 6 | 1.13% |
| Glutamic Acid GLU (E) | 23 | 4.32% |
| Aspartic Acid ASP (D) | 36 | 6.77% |
| Glycine GLY (G) | 49 | 9.21% |
| Phynylalanine PHE (F) | 17 | 3.2% |
| Isoleucine ILE (I) | 12 | 2.26% |
| Histidine HIS (H) | 19 | 3.57% |
| Lysine LYS (K) | 10 | 1.88% |
| Methionine MET (M) | 9 | 1.69% |
| Leucine LEU (L) | 48 | 9.02% |
| Asparagine ASN (N) | 12 | 2.26% |
| Glutamine GLN (Q) | 16 | 3.01% |
| Proline PRO (P) | 20 | 3.76% |
| Serine SER (S) | 37 | 6.95% |
| Arginine ARG (R) | 45 | 8.46% |
| Threonine THR (T) | 25 | 4.7% |
| Tryptophan TRP (W) | 12 | 2.26% |
| Valine VAL (V) | 34 | 6.39% |
| Tyrosine TYR (Y) | 29 | 5.45% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2598 |
| Hydrogen | H | 3959 |
| Nitrogen | N | 755 |
| Oxygen | O | 770 |
| Sulphur | S | 15 |
| Formula | C2598H3959N755O770S15 |
| Total Number of Atoms: | 8097 |
| Total number of positively charged residues (ARG + LYS): | 55 |
| Total number of negatively charged residues (ASP + GLU): | 59 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 109585 Absorption 0.1% (=1 g/l) 1.871, assuming all pairs of CYS residues form cystines Ext. coefficient 109210 Absorption 0.1% (=1 g/l) 1.865, assuming all CYS residues are reduced |
| Aromaticity: | 0.109 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.40 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.57, 22.18, 28.76] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 76.2406 |
| Grand average of hydropathicity (GRAVY): | -0.31 |