Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4572 |
| Number of amino acids: | 636 |
| Molecular Weight: | 70097.02 Da |
| Theoretical pI: | 5.54 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 43 | 6.76% |
| Cysteine CYS (C) | 5 | 0.79% |
| Glutamic Acid GLU (E) | 21 | 3.3% |
| Aspartic Acid ASP (D) | 46 | 7.23% |
| Glycine GLY (G) | 55 | 8.65% |
| Phynylalanine PHE (F) | 23 | 3.62% |
| Isoleucine ILE (I) | 32 | 5.03% |
| Histidine HIS (H) | 15 | 2.36% |
| Lysine LYS (K) | 33 | 5.19% |
| Methionine MET (M) | 8 | 1.26% |
| Leucine LEU (L) | 57 | 8.96% |
| Asparagine ASN (N) | 24 | 3.77% |
| Glutamine GLN (Q) | 28 | 4.4% |
| Proline PRO (P) | 39 | 6.13% |
| Serine SER (S) | 55 | 8.65% |
| Arginine ARG (R) | 20 | 3.14% |
| Threonine THR (T) | 38 | 5.97% |
| Tryptophan TRP (W) | 19 | 2.99% |
| Valine VAL (V) | 48 | 7.55% |
| Tyrosine TYR (Y) | 27 | 4.25% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3172 |
| Hydrogen | H | 4830 |
| Nitrogen | N | 830 |
| Oxygen | O | 943 |
| Sulphur | S | 13 |
| Formula | C3172H4830N830O943S13 |
| Total Number of Atoms: | 9788 |
| Total number of positively charged residues (ARG + LYS): | 53 |
| Total number of negatively charged residues (ASP + GLU): | 67 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 144980 Absorption 0.1% (=1 g/l) 2.068, assuming all pairs of CYS residues form cystines Ext. coefficient 144730 Absorption 0.1% (=1 g/l) 2.065, assuming all CYS residues are reduced |
| Aromaticity: | 0.108 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.41 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.39, 27.20, 20.28] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.2233 |
| Grand average of hydropathicity (GRAVY): | -0.25 |