Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4568 |
| Number of amino acids: | 665 |
| Molecular Weight: | 74887.24 Da |
| Theoretical pI: | 5.98 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 38 | 5.71% |
| Cysteine CYS (C) | 16 | 2.41% |
| Glutamic Acid GLU (E) | 37 | 5.56% |
| Aspartic Acid ASP (D) | 40 | 6.02% |
| Glycine GLY (G) | 40 | 6.02% |
| Phynylalanine PHE (F) | 44 | 6.62% |
| Isoleucine ILE (I) | 40 | 6.02% |
| Histidine HIS (H) | 9 | 1.35% |
| Lysine LYS (K) | 33 | 4.96% |
| Methionine MET (M) | 16 | 2.41% |
| Leucine LEU (L) | 62 | 9.32% |
| Asparagine ASN (N) | 37 | 5.56% |
| Glutamine GLN (Q) | 25 | 3.76% |
| Proline PRO (P) | 26 | 3.91% |
| Serine SER (S) | 66 | 9.92% |
| Arginine ARG (R) | 38 | 5.71% |
| Threonine THR (T) | 30 | 4.51% |
| Tryptophan TRP (W) | 6 | 0.9% |
| Valine VAL (V) | 41 | 6.17% |
| Tyrosine TYR (Y) | 21 | 3.16% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3336 |
| Hydrogen | H | 5190 |
| Nitrogen | N | 898 |
| Oxygen | O | 999 |
| Sulphur | S | 32 |
| Formula | C3336H5190N898O999S32 |
| Total Number of Atoms: | 10455 |
| Total number of positively charged residues (ARG + LYS): | 71 |
| Total number of negatively charged residues (ASP + GLU): | 77 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 65290 Absorption 0.1% (=1 g/l) 0.872, assuming all pairs of CYS residues form cystines Ext. coefficient 64290 Absorption 0.1% (=1 g/l) 0.858, assuming all CYS residues are reduced |
| Aromaticity: | 0.107 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.00 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.18, 25.41, 23.01] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.4135 |
| Grand average of hydropathicity (GRAVY): | -0.19 |