Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4563 |
| Number of amino acids: | 538 |
| Molecular Weight: | 61695.47 Da |
| Theoretical pI: | 8.54 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 30 | 5.58% |
| Cysteine CYS (C) | 10 | 1.86% |
| Glutamic Acid GLU (E) | 38 | 7.06% |
| Aspartic Acid ASP (D) | 28 | 5.2% |
| Glycine GLY (G) | 32 | 5.95% |
| Phynylalanine PHE (F) | 24 | 4.46% |
| Isoleucine ILE (I) | 34 | 6.32% |
| Histidine HIS (H) | 13 | 2.42% |
| Lysine LYS (K) | 30 | 5.58% |
| Methionine MET (M) | 21 | 3.9% |
| Leucine LEU (L) | 55 | 10.22% |
| Asparagine ASN (N) | 24 | 4.46% |
| Glutamine GLN (Q) | 13 | 2.42% |
| Proline PRO (P) | 32 | 5.95% |
| Serine SER (S) | 27 | 5.02% |
| Arginine ARG (R) | 41 | 7.62% |
| Threonine THR (T) | 30 | 5.58% |
| Tryptophan TRP (W) | 8 | 1.49% |
| Valine VAL (V) | 32 | 5.95% |
| Tyrosine TYR (Y) | 16 | 2.97% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2759 |
| Hydrogen | H | 4360 |
| Nitrogen | N | 762 |
| Oxygen | O | 781 |
| Sulphur | S | 31 |
| Formula | C2759H4360N762O781S31 |
| Total Number of Atoms: | 8693 |
| Total number of positively charged residues (ARG + LYS): | 71 |
| Total number of negatively charged residues (ASP + GLU): | 66 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 68465 Absorption 0.1% (=1 g/l) 1.110, assuming all pairs of CYS residues form cystines Ext. coefficient 67840 Absorption 0.1% (=1 g/l) 1.100, assuming all CYS residues are reduced |
| Aromaticity: | 0.089 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.90 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.41, 21.38, 26.77] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 87.3418 |
| Grand average of hydropathicity (GRAVY): | -0.29 |