Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4560 |
| Number of amino acids: | 269 |
| Molecular Weight: | 29658.85 Da |
| Theoretical pI: | 6.34 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 16 | 5.95% |
| Cysteine CYS (C) | 8 | 2.97% |
| Glutamic Acid GLU (E) | 7 | 2.6% |
| Aspartic Acid ASP (D) | 15 | 5.58% |
| Glycine GLY (G) | 32 | 11.9% |
| Phynylalanine PHE (F) | 15 | 5.58% |
| Isoleucine ILE (I) | 13 | 4.83% |
| Histidine HIS (H) | 3 | 1.12% |
| Lysine LYS (K) | 15 | 5.58% |
| Methionine MET (M) | 12 | 4.46% |
| Leucine LEU (L) | 15 | 5.58% |
| Asparagine ASN (N) | 16 | 5.95% |
| Glutamine GLN (Q) | 12 | 4.46% |
| Proline PRO (P) | 13 | 4.83% |
| Serine SER (S) | 12 | 4.46% |
| Arginine ARG (R) | 6 | 2.23% |
| Threonine THR (T) | 20 | 7.43% |
| Tryptophan TRP (W) | 7 | 2.6% |
| Valine VAL (V) | 19 | 7.06% |
| Tyrosine TYR (Y) | 13 | 4.83% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1332 |
| Hydrogen | H | 2007 |
| Nitrogen | N | 343 |
| Oxygen | O | 387 |
| Sulphur | S | 20 |
| Formula | C1332H2007N343O387S20 |
| Total Number of Atoms: | 4089 |
| Total number of positively charged residues (ARG + LYS): | 21 |
| Total number of negatively charged residues (ASP + GLU): | 22 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 58370 Absorption 0.1% (=1 g/l) 1.968, assuming all pairs of CYS residues form cystines Ext. coefficient 57870 Absorption 0.1% (=1 g/l) 1.951, assuming all CYS residues are reduced |
| Aromaticity: | 0.130 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 23.89 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.48, 27.14, 18.59] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 67.026 |
| Grand average of hydropathicity (GRAVY): | -0.15 |