Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4559 |
| Number of amino acids: | 625 |
| Molecular Weight: | 67463.39 Da |
| Theoretical pI: | 8.76 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 45 | 7.2% |
| Cysteine CYS (C) | 10 | 1.6% |
| Glutamic Acid GLU (E) | 29 | 4.64% |
| Aspartic Acid ASP (D) | 26 | 4.16% |
| Glycine GLY (G) | 50 | 8% |
| Phynylalanine PHE (F) | 28 | 4.48% |
| Isoleucine ILE (I) | 33 | 5.28% |
| Histidine HIS (H) | 8 | 1.28% |
| Lysine LYS (K) | 31 | 4.96% |
| Methionine MET (M) | 6 | 0.96% |
| Leucine LEU (L) | 77 | 12.32% |
| Asparagine ASN (N) | 35 | 5.6% |
| Glutamine GLN (Q) | 18 | 2.88% |
| Proline PRO (P) | 41 | 6.56% |
| Serine SER (S) | 61 | 9.76% |
| Arginine ARG (R) | 31 | 4.96% |
| Threonine THR (T) | 34 | 5.44% |
| Tryptophan TRP (W) | 4 | 0.64% |
| Valine VAL (V) | 45 | 7.2% |
| Tyrosine TYR (Y) | 13 | 2.08% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3016 |
| Hydrogen | H | 4822 |
| Nitrogen | N | 822 |
| Oxygen | O | 897 |
| Sulphur | S | 16 |
| Formula | C3016H4822N822O897S16 |
| Total Number of Atoms: | 9573 |
| Total number of positively charged residues (ARG + LYS): | 62 |
| Total number of negatively charged residues (ASP + GLU): | 55 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 41995 Absorption 0.1% (=1 g/l) 0.622, assuming all pairs of CYS residues form cystines Ext. coefficient 41370 Absorption 0.1% (=1 g/l) 0.613, assuming all CYS residues are reduced |
| Aromaticity: | 0.072 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.35 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.00, 29.92, 25.12] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 96.72 |
| Grand average of hydropathicity (GRAVY): | -0.03 |