Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4557 |
| Number of amino acids: | 673 |
| Molecular Weight: | 75674.38 Da |
| Theoretical pI: | 5.63 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 40 | 5.94% |
| Cysteine CYS (C) | 8 | 1.19% |
| Glutamic Acid GLU (E) | 38 | 5.65% |
| Aspartic Acid ASP (D) | 37 | 5.5% |
| Glycine GLY (G) | 52 | 7.73% |
| Phynylalanine PHE (F) | 31 | 4.61% |
| Isoleucine ILE (I) | 44 | 6.54% |
| Histidine HIS (H) | 17 | 2.53% |
| Lysine LYS (K) | 33 | 4.9% |
| Methionine MET (M) | 13 | 1.93% |
| Leucine LEU (L) | 74 | 11% |
| Asparagine ASN (N) | 32 | 4.75% |
| Glutamine GLN (Q) | 21 | 3.12% |
| Proline PRO (P) | 36 | 5.35% |
| Serine SER (S) | 55 | 8.17% |
| Arginine ARG (R) | 27 | 4.01% |
| Threonine THR (T) | 26 | 3.86% |
| Tryptophan TRP (W) | 16 | 2.38% |
| Valine VAL (V) | 42 | 6.24% |
| Tyrosine TYR (Y) | 31 | 4.61% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3447 |
| Hydrogen | H | 5268 |
| Nitrogen | N | 890 |
| Oxygen | O | 989 |
| Sulphur | S | 21 |
| Formula | C3447H5268N890O989S21 |
| Total Number of Atoms: | 10615 |
| Total number of positively charged residues (ARG + LYS): | 60 |
| Total number of negatively charged residues (ASP + GLU): | 75 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 134690 Absorption 0.1% (=1 g/l) 1.780, assuming all pairs of CYS residues form cystines Ext. coefficient 134190 Absorption 0.1% (=1 g/l) 1.773, assuming all CYS residues are reduced |
| Aromaticity: | 0.116 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 45.00 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [35.36, 26.00, 24.52] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 92.4218 |
| Grand average of hydropathicity (GRAVY): | -0.13 |