Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4544 |
| Number of amino acids: | 297 |
| Molecular Weight: | 34238.6 Da |
| Theoretical pI: | 8.52 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 12 | 4.04% |
| Cysteine CYS (C) | 7 | 2.36% |
| Glutamic Acid GLU (E) | 4 | 1.35% |
| Aspartic Acid ASP (D) | 1 | 0.34% |
| Glycine GLY (G) | 7 | 2.36% |
| Phynylalanine PHE (F) | 11 | 3.7% |
| Isoleucine ILE (I) | 16 | 5.39% |
| Histidine HIS (H) | 5 | 1.68% |
| Lysine LYS (K) | 2 | 0.67% |
| Methionine MET (M) | 3 | 1.01% |
| Leucine LEU (L) | 21 | 7.07% |
| Asparagine ASN (N) | 6 | 2.02% |
| Glutamine GLN (Q) | 102 | 34.34% |
| Proline PRO (P) | 43 | 14.48% |
| Serine SER (S) | 16 | 5.39% |
| Arginine ARG (R) | 6 | 2.02% |
| Threonine THR (T) | 8 | 2.69% |
| Tryptophan TRP (W) | 1 | 0.34% |
| Valine VAL (V) | 16 | 5.39% |
| Tyrosine TYR (Y) | 10 | 3.37% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1519 |
| Hydrogen | H | 2348 |
| Nitrogen | N | 436 |
| Oxygen | O | 450 |
| Sulphur | S | 10 |
| Formula | C1519H2348N436O450S10 |
| Total Number of Atoms: | 4763 |
| Total number of positively charged residues (ARG + LYS): | 8 |
| Total number of negatively charged residues (ASP + GLU): | 5 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 20775 Absorption 0.1% (=1 g/l) 0.607, assuming all pairs of CYS residues form cystines Ext. coefficient 20400 Absorption 0.1% (=1 g/l) 0.596, assuming all CYS residues are reduced |
| Aromaticity: | 0.074 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 112.31 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.25, 24.24, 13.47] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 68.2492 |
| Grand average of hydropathicity (GRAVY): | -0.86 |