Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4535 |
| Number of amino acids: | 272 |
| Molecular Weight: | 28840.69 Da |
| Theoretical pI: | 7.75 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 30 | 11.03% |
| Cysteine CYS (C) | 8 | 2.94% |
| Glutamic Acid GLU (E) | 8 | 2.94% |
| Aspartic Acid ASP (D) | 14 | 5.15% |
| Glycine GLY (G) | 31 | 11.4% |
| Phynylalanine PHE (F) | 13 | 4.78% |
| Isoleucine ILE (I) | 8 | 2.94% |
| Histidine HIS (H) | 6 | 2.21% |
| Lysine LYS (K) | 9 | 3.31% |
| Methionine MET (M) | 5 | 1.84% |
| Leucine LEU (L) | 20 | 7.35% |
| Asparagine ASN (N) | 6 | 2.21% |
| Glutamine GLN (Q) | 8 | 2.94% |
| Proline PRO (P) | 11 | 4.04% |
| Serine SER (S) | 24 | 8.82% |
| Arginine ARG (R) | 14 | 5.15% |
| Threonine THR (T) | 20 | 7.35% |
| Tryptophan TRP (W) | 7 | 2.57% |
| Valine VAL (V) | 24 | 8.82% |
| Tyrosine TYR (Y) | 6 | 2.21% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1278 |
| Hydrogen | H | 1976 |
| Nitrogen | N | 356 |
| Oxygen | O | 381 |
| Sulphur | S | 13 |
| Formula | C1278H1976N356O381S13 |
| Total Number of Atoms: | 4004 |
| Total number of positively charged residues (ARG + LYS): | 23 |
| Total number of negatively charged residues (ASP + GLU): | 22 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 47940 Absorption 0.1% (=1 g/l) 1.662, assuming all pairs of CYS residues form cystines Ext. coefficient 47440 Absorption 0.1% (=1 g/l) 1.645, assuming all CYS residues are reduced |
| Aromaticity: | 0.096 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 32.00 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.68, 26.47, 23.16] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 76.7647 |
| Grand average of hydropathicity (GRAVY): | 0.04 |