Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4534 |
| Number of amino acids: | 322 |
| Molecular Weight: | 34646.18 Da |
| Theoretical pI: | 7.68 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 33 | 10.25% |
| Cysteine CYS (C) | 10 | 3.11% |
| Glutamic Acid GLU (E) | 11 | 3.42% |
| Aspartic Acid ASP (D) | 20 | 6.21% |
| Glycine GLY (G) | 23 | 7.14% |
| Phynylalanine PHE (F) | 16 | 4.97% |
| Isoleucine ILE (I) | 20 | 6.21% |
| Histidine HIS (H) | 4 | 1.24% |
| Lysine LYS (K) | 12 | 3.73% |
| Methionine MET (M) | 6 | 1.86% |
| Leucine LEU (L) | 29 | 9.01% |
| Asparagine ASN (N) | 18 | 5.59% |
| Glutamine GLN (Q) | 14 | 4.35% |
| Proline PRO (P) | 13 | 4.04% |
| Serine SER (S) | 34 | 10.56% |
| Arginine ARG (R) | 20 | 6.21% |
| Threonine THR (T) | 20 | 6.21% |
| Tryptophan TRP (W) | 1 | 0.31% |
| Valine VAL (V) | 14 | 4.35% |
| Tyrosine TYR (Y) | 4 | 1.24% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1500 |
| Hydrogen | H | 2405 |
| Nitrogen | N | 435 |
| Oxygen | O | 475 |
| Sulphur | S | 16 |
| Formula | C1500H2405N435O475S16 |
| Total Number of Atoms: | 4831 |
| Total number of positively charged residues (ARG + LYS): | 32 |
| Total number of negatively charged residues (ASP + GLU): | 31 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 12085 Absorption 0.1% (=1 g/l) 0.349, assuming all pairs of CYS residues form cystines Ext. coefficient 11460 Absorption 0.1% (=1 g/l) 0.331, assuming all CYS residues are reduced |
| Aromaticity: | 0.065 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.39 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.09, 27.33, 24.53] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.2049 |
| Grand average of hydropathicity (GRAVY): | -0.15 |