Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4533 |
| Number of amino acids: | 501 |
| Molecular Weight: | 55601.59 Da |
| Theoretical pI: | 4.81 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 36 | 7.19% |
| Cysteine CYS (C) | 5 | 1% |
| Glutamic Acid GLU (E) | 46 | 9.18% |
| Aspartic Acid ASP (D) | 36 | 7.19% |
| Glycine GLY (G) | 27 | 5.39% |
| Phynylalanine PHE (F) | 34 | 6.79% |
| Isoleucine ILE (I) | 26 | 5.19% |
| Histidine HIS (H) | 7 | 1.4% |
| Lysine LYS (K) | 46 | 9.18% |
| Methionine MET (M) | 4 | 0.8% |
| Leucine LEU (L) | 34 | 6.79% |
| Asparagine ASN (N) | 20 | 3.99% |
| Glutamine GLN (Q) | 15 | 2.99% |
| Proline PRO (P) | 24 | 4.79% |
| Serine SER (S) | 43 | 8.58% |
| Arginine ARG (R) | 10 | 2% |
| Threonine THR (T) | 27 | 5.39% |
| Tryptophan TRP (W) | 3 | 0.6% |
| Valine VAL (V) | 45 | 8.98% |
| Tyrosine TYR (Y) | 13 | 2.59% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2502 |
| Hydrogen | H | 3877 |
| Nitrogen | N | 629 |
| Oxygen | O | 784 |
| Sulphur | S | 9 |
| Formula | C2502H3877N629O784S9 |
| Total Number of Atoms: | 7801 |
| Total number of positively charged residues (ARG + LYS): | 56 |
| Total number of negatively charged residues (ASP + GLU): | 82 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 36120 Absorption 0.1% (=1 g/l) 0.650, assuming all pairs of CYS residues form cystines Ext. coefficient 35870 Absorption 0.1% (=1 g/l) 0.645, assuming all CYS residues are reduced |
| Aromaticity: | 0.100 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 28.78 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.94, 22.75, 23.95] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.9401 |
| Grand average of hydropathicity (GRAVY): | -0.33 |