Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4532 |
| Number of amino acids: | 494 |
| Molecular Weight: | 54335.95 Da |
| Theoretical pI: | 5.56 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 37 | 7.49% |
| Cysteine CYS (C) | 8 | 1.62% |
| Glutamic Acid GLU (E) | 26 | 5.26% |
| Aspartic Acid ASP (D) | 31 | 6.28% |
| Glycine GLY (G) | 43 | 8.7% |
| Phynylalanine PHE (F) | 16 | 3.24% |
| Isoleucine ILE (I) | 19 | 3.85% |
| Histidine HIS (H) | 14 | 2.83% |
| Lysine LYS (K) | 23 | 4.66% |
| Methionine MET (M) | 12 | 2.43% |
| Leucine LEU (L) | 40 | 8.1% |
| Asparagine ASN (N) | 29 | 5.87% |
| Glutamine GLN (Q) | 17 | 3.44% |
| Proline PRO (P) | 26 | 5.26% |
| Serine SER (S) | 41 | 8.3% |
| Arginine ARG (R) | 21 | 4.25% |
| Threonine THR (T) | 23 | 4.66% |
| Tryptophan TRP (W) | 7 | 1.42% |
| Valine VAL (V) | 38 | 7.69% |
| Tyrosine TYR (Y) | 23 | 4.66% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2401 |
| Hydrogen | H | 3697 |
| Nitrogen | N | 661 |
| Oxygen | O | 742 |
| Sulphur | S | 20 |
| Formula | C2401H3697N661O742S20 |
| Total Number of Atoms: | 7521 |
| Total number of positively charged residues (ARG + LYS): | 44 |
| Total number of negatively charged residues (ASP + GLU): | 57 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 73270 Absorption 0.1% (=1 g/l) 1.348, assuming all pairs of CYS residues form cystines Ext. coefficient 72770 Absorption 0.1% (=1 g/l) 1.339, assuming all CYS residues are reduced |
| Aromaticity: | 0.093 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 45.06 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.95, 28.14, 23.28] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 76.3765 |
| Grand average of hydropathicity (GRAVY): | -0.37 |