Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4531 |
| Number of amino acids: | 760 |
| Molecular Weight: | 83602.83 Da |
| Theoretical pI: | 9.15 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 50 | 6.58% |
| Cysteine CYS (C) | 9 | 1.18% |
| Glutamic Acid GLU (E) | 48 | 6.32% |
| Aspartic Acid ASP (D) | 36 | 4.74% |
| Glycine GLY (G) | 45 | 5.92% |
| Phynylalanine PHE (F) | 35 | 4.61% |
| Isoleucine ILE (I) | 28 | 3.68% |
| Histidine HIS (H) | 11 | 1.45% |
| Lysine LYS (K) | 57 | 7.5% |
| Methionine MET (M) | 18 | 2.37% |
| Leucine LEU (L) | 67 | 8.82% |
| Asparagine ASN (N) | 30 | 3.95% |
| Glutamine GLN (Q) | 23 | 3.03% |
| Proline PRO (P) | 66 | 8.68% |
| Serine SER (S) | 75 | 9.87% |
| Arginine ARG (R) | 42 | 5.53% |
| Threonine THR (T) | 42 | 5.53% |
| Tryptophan TRP (W) | 5 | 0.66% |
| Valine VAL (V) | 60 | 7.89% |
| Tyrosine TYR (Y) | 13 | 1.71% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3716 |
| Hydrogen | H | 5937 |
| Nitrogen | N | 1023 |
| Oxygen | O | 1112 |
| Sulphur | S | 27 |
| Formula | C3716H5937N1023O1112S27 |
| Total Number of Atoms: | 11815 |
| Total number of positively charged residues (ARG + LYS): | 99 |
| Total number of negatively charged residues (ASP + GLU): | 84 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 47370 Absorption 0.1% (=1 g/l) 0.567, assuming all pairs of CYS residues form cystines Ext. coefficient 46870 Absorption 0.1% (=1 g/l) 0.561, assuming all CYS residues are reduced |
| Aromaticity: | 0.070 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 56.79 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.37, 28.42, 24.08] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 78.2237 |
| Grand average of hydropathicity (GRAVY): | -0.37 |