Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4522 |
| Number of amino acids: | 892 |
| Molecular Weight: | 95343.87 Da |
| Theoretical pI: | 9.14 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 95 | 10.65% |
| Cysteine CYS (C) | 6 | 0.67% |
| Glutamic Acid GLU (E) | 52 | 5.83% |
| Aspartic Acid ASP (D) | 50 | 5.61% |
| Glycine GLY (G) | 65 | 7.29% |
| Phynylalanine PHE (F) | 30 | 3.36% |
| Isoleucine ILE (I) | 22 | 2.47% |
| Histidine HIS (H) | 14 | 1.57% |
| Lysine LYS (K) | 43 | 4.82% |
| Methionine MET (M) | 17 | 1.91% |
| Leucine LEU (L) | 75 | 8.41% |
| Asparagine ASN (N) | 23 | 2.58% |
| Glutamine GLN (Q) | 18 | 2.02% |
| Proline PRO (P) | 107 | 12% |
| Serine SER (S) | 80 | 8.97% |
| Arginine ARG (R) | 70 | 7.85% |
| Threonine THR (T) | 62 | 6.95% |
| Tryptophan TRP (W) | 4 | 0.45% |
| Valine VAL (V) | 49 | 5.49% |
| Tyrosine TYR (Y) | 10 | 1.12% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4176 |
| Hydrogen | H | 6696 |
| Nitrogen | N | 1218 |
| Oxygen | O | 1290 |
| Sulphur | S | 23 |
| Formula | C4176H6696N1218O1290S23 |
| Total Number of Atoms: | 13403 |
| Total number of positively charged residues (ARG + LYS): | 113 |
| Total number of negatively charged residues (ASP + GLU): | 102 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 37275 Absorption 0.1% (=1 g/l) 0.391, assuming all pairs of CYS residues form cystines Ext. coefficient 36900 Absorption 0.1% (=1 g/l) 0.387, assuming all CYS residues are reduced |
| Aromaticity: | 0.049 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 56.55 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [21.30, 30.83, 26.79] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 68.991 |
| Grand average of hydropathicity (GRAVY): | -0.51 |