Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4518 |
| Number of amino acids: | 347 |
| Molecular Weight: | 38111.88 Da |
| Theoretical pI: | 8.73 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 31 | 8.93% |
| Cysteine CYS (C) | 1 | 0.29% |
| Glutamic Acid GLU (E) | 14 | 4.03% |
| Aspartic Acid ASP (D) | 15 | 4.32% |
| Glycine GLY (G) | 25 | 7.2% |
| Phynylalanine PHE (F) | 17 | 4.9% |
| Isoleucine ILE (I) | 16 | 4.61% |
| Histidine HIS (H) | 2 | 0.58% |
| Lysine LYS (K) | 16 | 4.61% |
| Methionine MET (M) | 5 | 1.44% |
| Leucine LEU (L) | 30 | 8.65% |
| Asparagine ASN (N) | 32 | 9.22% |
| Glutamine GLN (Q) | 13 | 3.75% |
| Proline PRO (P) | 19 | 5.48% |
| Serine SER (S) | 32 | 9.22% |
| Arginine ARG (R) | 16 | 4.61% |
| Threonine THR (T) | 16 | 4.61% |
| Tryptophan TRP (W) | 3 | 0.86% |
| Valine VAL (V) | 26 | 7.49% |
| Tyrosine TYR (Y) | 18 | 5.19% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1707 |
| Hydrogen | H | 2639 |
| Nitrogen | N | 463 |
| Oxygen | O | 517 |
| Sulphur | S | 6 |
| Formula | C1707H2639N463O517S6 |
| Total Number of Atoms: | 5332 |
| Total number of positively charged residues (ARG + LYS): | 32 |
| Total number of negatively charged residues (ASP + GLU): | 29 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 43320 Absorption 0.1% (=1 g/l) 1.137, assuming all pairs of CYS residues form cystines Ext. coefficient 43320 Absorption 0.1% (=1 g/l) 1.137, assuming all CYS residues are reduced |
| Aromaticity: | 0.110 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.44 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.70, 31.12, 23.05] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.3631 |
| Grand average of hydropathicity (GRAVY): | -0.27 |