Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4515 |
| Number of amino acids: | 499 |
| Molecular Weight: | 56329.07 Da |
| Theoretical pI: | 8.67 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 34 | 6.81% |
| Cysteine CYS (C) | 8 | 1.6% |
| Glutamic Acid GLU (E) | 22 | 4.41% |
| Aspartic Acid ASP (D) | 27 | 5.41% |
| Glycine GLY (G) | 34 | 6.81% |
| Phynylalanine PHE (F) | 28 | 5.61% |
| Isoleucine ILE (I) | 16 | 3.21% |
| Histidine HIS (H) | 12 | 2.4% |
| Lysine LYS (K) | 33 | 6.61% |
| Methionine MET (M) | 8 | 1.6% |
| Leucine LEU (L) | 48 | 9.62% |
| Asparagine ASN (N) | 25 | 5.01% |
| Glutamine GLN (Q) | 16 | 3.21% |
| Proline PRO (P) | 28 | 5.61% |
| Serine SER (S) | 40 | 8.02% |
| Arginine ARG (R) | 22 | 4.41% |
| Threonine THR (T) | 28 | 5.61% |
| Tryptophan TRP (W) | 12 | 2.4% |
| Valine VAL (V) | 34 | 6.81% |
| Tyrosine TYR (Y) | 24 | 4.81% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2560 |
| Hydrogen | H | 3887 |
| Nitrogen | N | 675 |
| Oxygen | O | 731 |
| Sulphur | S | 16 |
| Formula | C2560H3887N675O731S16 |
| Total Number of Atoms: | 7869 |
| Total number of positively charged residues (ARG + LYS): | 55 |
| Total number of negatively charged residues (ASP + GLU): | 49 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 102260 Absorption 0.1% (=1 g/l) 1.815, assuming all pairs of CYS residues form cystines Ext. coefficient 101760 Absorption 0.1% (=1 g/l) 1.807, assuming all CYS residues are reduced |
| Aromaticity: | 0.128 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.19 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.46, 25.45, 22.44] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 76.5932 |
| Grand average of hydropathicity (GRAVY): | -0.32 |