Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4514 |
| Number of amino acids: | 399 |
| Molecular Weight: | 45338.67 Da |
| Theoretical pI: | 8.93 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 19 | 4.76% |
| Cysteine CYS (C) | 3 | 0.75% |
| Glutamic Acid GLU (E) | 13 | 3.26% |
| Aspartic Acid ASP (D) | 19 | 4.76% |
| Glycine GLY (G) | 31 | 7.77% |
| Phynylalanine PHE (F) | 25 | 6.27% |
| Isoleucine ILE (I) | 27 | 6.77% |
| Histidine HIS (H) | 6 | 1.5% |
| Lysine LYS (K) | 27 | 6.77% |
| Methionine MET (M) | 11 | 2.76% |
| Leucine LEU (L) | 32 | 8.02% |
| Asparagine ASN (N) | 30 | 7.52% |
| Glutamine GLN (Q) | 22 | 5.51% |
| Proline PRO (P) | 16 | 4.01% |
| Serine SER (S) | 31 | 7.77% |
| Arginine ARG (R) | 11 | 2.76% |
| Threonine THR (T) | 23 | 5.76% |
| Tryptophan TRP (W) | 10 | 2.51% |
| Valine VAL (V) | 23 | 5.76% |
| Tyrosine TYR (Y) | 20 | 5.01% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2067 |
| Hydrogen | H | 3133 |
| Nitrogen | N | 533 |
| Oxygen | O | 590 |
| Sulphur | S | 14 |
| Formula | C2067H3133N533O590S14 |
| Total Number of Atoms: | 6337 |
| Total number of positively charged residues (ARG + LYS): | 38 |
| Total number of negatively charged residues (ASP + GLU): | 32 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 84925 Absorption 0.1% (=1 g/l) 1.873, assuming all pairs of CYS residues form cystines Ext. coefficient 84800 Absorption 0.1% (=1 g/l) 1.870, assuming all CYS residues are reduced |
| Aromaticity: | 0.138 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 27.48 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.34, 27.07, 18.80] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.1479 |
| Grand average of hydropathicity (GRAVY): | -0.28 |