Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4512 |
| Number of amino acids: | 434 |
| Molecular Weight: | 48456.54 Da |
| Theoretical pI: | 5.06 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 35 | 8.06% |
| Cysteine CYS (C) | 3 | 0.69% |
| Glutamic Acid GLU (E) | 23 | 5.3% |
| Aspartic Acid ASP (D) | 36 | 8.29% |
| Glycine GLY (G) | 46 | 10.6% |
| Phynylalanine PHE (F) | 18 | 4.15% |
| Isoleucine ILE (I) | 29 | 6.68% |
| Histidine HIS (H) | 16 | 3.69% |
| Lysine LYS (K) | 20 | 4.61% |
| Methionine MET (M) | 11 | 2.53% |
| Leucine LEU (L) | 34 | 7.83% |
| Asparagine ASN (N) | 20 | 4.61% |
| Glutamine GLN (Q) | 13 | 3% |
| Proline PRO (P) | 20 | 4.61% |
| Serine SER (S) | 19 | 4.38% |
| Arginine ARG (R) | 17 | 3.92% |
| Threonine THR (T) | 18 | 4.15% |
| Tryptophan TRP (W) | 16 | 3.69% |
| Valine VAL (V) | 25 | 5.76% |
| Tyrosine TYR (Y) | 15 | 3.46% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2188 |
| Hydrogen | H | 3286 |
| Nitrogen | N | 586 |
| Oxygen | O | 638 |
| Sulphur | S | 14 |
| Formula | C2188H3286N586O638S14 |
| Total Number of Atoms: | 6712 |
| Total number of positively charged residues (ARG + LYS): | 37 |
| Total number of negatively charged residues (ASP + GLU): | 59 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 110475 Absorption 0.1% (=1 g/l) 2.280, assuming all pairs of CYS residues form cystines Ext. coefficient 110350 Absorption 0.1% (=1 g/l) 2.277, assuming all CYS residues are reduced |
| Aromaticity: | 0.113 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 23.92 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.57, 24.19, 23.73] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 81.3825 |
| Grand average of hydropathicity (GRAVY): | -0.31 |