Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4510 |
| Number of amino acids: | 518 |
| Molecular Weight: | 58675.59 Da |
| Theoretical pI: | 7.77 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 33 | 6.37% |
| Cysteine CYS (C) | 7 | 1.35% |
| Glutamic Acid GLU (E) | 29 | 5.6% |
| Aspartic Acid ASP (D) | 15 | 2.9% |
| Glycine GLY (G) | 37 | 7.14% |
| Phynylalanine PHE (F) | 30 | 5.79% |
| Isoleucine ILE (I) | 27 | 5.21% |
| Histidine HIS (H) | 11 | 2.12% |
| Lysine LYS (K) | 15 | 2.9% |
| Methionine MET (M) | 6 | 1.16% |
| Leucine LEU (L) | 39 | 7.53% |
| Asparagine ASN (N) | 34 | 6.56% |
| Glutamine GLN (Q) | 69 | 13.32% |
| Proline PRO (P) | 25 | 4.83% |
| Serine SER (S) | 39 | 7.53% |
| Arginine ARG (R) | 30 | 5.79% |
| Threonine THR (T) | 19 | 3.67% |
| Tryptophan TRP (W) | 4 | 0.77% |
| Valine VAL (V) | 31 | 5.98% |
| Tyrosine TYR (Y) | 18 | 3.47% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2591 |
| Hydrogen | H | 3998 |
| Nitrogen | N | 752 |
| Oxygen | O | 786 |
| Sulphur | S | 13 |
| Formula | C2591H3998N752O786S13 |
| Total Number of Atoms: | 8140 |
| Total number of positively charged residues (ARG + LYS): | 45 |
| Total number of negatively charged residues (ASP + GLU): | 44 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 49195 Absorption 0.1% (=1 g/l) 0.838, assuming all pairs of CYS residues form cystines Ext. coefficient 48820 Absorption 0.1% (=1 g/l) 0.832, assuming all CYS residues are reduced |
| Aromaticity: | 0.100 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 59.20 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.76, 26.06, 20.66] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 73.417 |
| Grand average of hydropathicity (GRAVY): | -0.57 |