Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4506 |
| Number of amino acids: | 667 |
| Molecular Weight: | 73522.32 Da |
| Theoretical pI: | 5.07 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 53 | 7.95% |
| Cysteine CYS (C) | 4 | 0.6% |
| Glutamic Acid GLU (E) | 62 | 9.3% |
| Aspartic Acid ASP (D) | 52 | 7.8% |
| Glycine GLY (G) | 58 | 8.7% |
| Phynylalanine PHE (F) | 24 | 3.6% |
| Isoleucine ILE (I) | 49 | 7.35% |
| Histidine HIS (H) | 5 | 0.75% |
| Lysine LYS (K) | 63 | 9.45% |
| Methionine MET (M) | 10 | 1.5% |
| Leucine LEU (L) | 50 | 7.5% |
| Asparagine ASN (N) | 28 | 4.2% |
| Glutamine GLN (Q) | 22 | 3.3% |
| Proline PRO (P) | 20 | 3% |
| Serine SER (S) | 26 | 3.9% |
| Arginine ARG (R) | 30 | 4.5% |
| Threonine THR (T) | 44 | 6.6% |
| Tryptophan TRP (W) | 3 | 0.45% |
| Valine VAL (V) | 49 | 7.35% |
| Tyrosine TYR (Y) | 15 | 2.25% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3242 |
| Hydrogen | H | 5229 |
| Nitrogen | N | 883 |
| Oxygen | O | 1031 |
| Sulphur | S | 14 |
| Formula | C3242H5229N883O1031S14 |
| Total Number of Atoms: | 10399 |
| Total number of positively charged residues (ARG + LYS): | 93 |
| Total number of negatively charged residues (ASP + GLU): | 114 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 39100 Absorption 0.1% (=1 g/l) 0.532, assuming all pairs of CYS residues form cystines Ext. coefficient 38850 Absorption 0.1% (=1 g/l) 0.528, assuming all CYS residues are reduced |
| Aromaticity: | 0.063 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 28.31 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.49, 19.79, 26.24] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 87.1364 |
| Grand average of hydropathicity (GRAVY): | -0.44 |