Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4505 |
| Number of amino acids: | 435 |
| Molecular Weight: | 47381.38 Da |
| Theoretical pI: | 5.45 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 34 | 7.82% |
| Cysteine CYS (C) | 5 | 1.15% |
| Glutamic Acid GLU (E) | 30 | 6.9% |
| Aspartic Acid ASP (D) | 18 | 4.14% |
| Glycine GLY (G) | 32 | 7.36% |
| Phynylalanine PHE (F) | 23 | 5.29% |
| Isoleucine ILE (I) | 20 | 4.6% |
| Histidine HIS (H) | 15 | 3.45% |
| Lysine LYS (K) | 22 | 5.06% |
| Methionine MET (M) | 13 | 2.99% |
| Leucine LEU (L) | 50 | 11.49% |
| Asparagine ASN (N) | 19 | 4.37% |
| Glutamine GLN (Q) | 16 | 3.68% |
| Proline PRO (P) | 23 | 5.29% |
| Serine SER (S) | 36 | 8.28% |
| Arginine ARG (R) | 11 | 2.53% |
| Threonine THR (T) | 20 | 4.6% |
| Tryptophan TRP (W) | 2 | 0.46% |
| Valine VAL (V) | 38 | 8.74% |
| Tyrosine TYR (Y) | 8 | 1.84% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2126 |
| Hydrogen | H | 3345 |
| Nitrogen | N | 557 |
| Oxygen | O | 631 |
| Sulphur | S | 18 |
| Formula | C2126H3345N557O631S18 |
| Total Number of Atoms: | 6677 |
| Total number of positively charged residues (ARG + LYS): | 33 |
| Total number of negatively charged residues (ASP + GLU): | 48 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 23170 Absorption 0.1% (=1 g/l) 0.489, assuming all pairs of CYS residues form cystines Ext. coefficient 22920 Absorption 0.1% (=1 g/l) 0.484, assuming all CYS residues are reduced |
| Aromaticity: | 0.076 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 43.85 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.41, 25.29, 29.20] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 95.9082 |
| Grand average of hydropathicity (GRAVY): | 0.06 |