Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4503 |
| Number of amino acids: | 687 |
| Molecular Weight: | 74911.4 Da |
| Theoretical pI: | 7.69 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 4.66% |
| Cysteine CYS (C) | 9 | 1.31% |
| Glutamic Acid GLU (E) | 28 | 4.08% |
| Aspartic Acid ASP (D) | 40 | 5.82% |
| Glycine GLY (G) | 56 | 8.15% |
| Phynylalanine PHE (F) | 27 | 3.93% |
| Isoleucine ILE (I) | 30 | 4.37% |
| Histidine HIS (H) | 13 | 1.89% |
| Lysine LYS (K) | 42 | 6.11% |
| Methionine MET (M) | 12 | 1.75% |
| Leucine LEU (L) | 77 | 11.21% |
| Asparagine ASN (N) | 49 | 7.13% |
| Glutamine GLN (Q) | 24 | 3.49% |
| Proline PRO (P) | 37 | 5.39% |
| Serine SER (S) | 84 | 12.23% |
| Arginine ARG (R) | 27 | 3.93% |
| Threonine THR (T) | 38 | 5.53% |
| Tryptophan TRP (W) | 6 | 0.87% |
| Valine VAL (V) | 38 | 5.53% |
| Tyrosine TYR (Y) | 18 | 2.62% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3295 |
| Hydrogen | H | 5213 |
| Nitrogen | N | 915 |
| Oxygen | O | 1037 |
| Sulphur | S | 21 |
| Formula | C3295H5213N915O1037S21 |
| Total Number of Atoms: | 10481 |
| Total number of positively charged residues (ARG + LYS): | 69 |
| Total number of negatively charged residues (ASP + GLU): | 68 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 60320 Absorption 0.1% (=1 g/l) 0.805, assuming all pairs of CYS residues form cystines Ext. coefficient 59820 Absorption 0.1% (=1 g/l) 0.799, assuming all CYS residues are reduced |
| Aromaticity: | 0.074 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 39.97 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.53, 32.90, 21.69] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 81.4412 |
| Grand average of hydropathicity (GRAVY): | -0.38 |