Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4502 |
| Number of amino acids: | 209 |
| Molecular Weight: | 20489.28 Da |
| Theoretical pI: | 9.17 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 15.31% |
| Cysteine CYS (C) | 1 | 0.48% |
| Glutamic Acid GLU (E) | 5 | 2.39% |
| Aspartic Acid ASP (D) | 6 | 2.87% |
| Glycine GLY (G) | 8 | 3.83% |
| Phynylalanine PHE (F) | 3 | 1.44% |
| Isoleucine ILE (I) | 3 | 1.44% |
| Histidine HIS (H) | 2 | 0.96% |
| Lysine LYS (K) | 11 | 5.26% |
| Methionine MET (M) | 3 | 1.44% |
| Leucine LEU (L) | 7 | 3.35% |
| Asparagine ASN (N) | 3 | 1.44% |
| Glutamine GLN (Q) | 3 | 1.44% |
| Proline PRO (P) | 46 | 22.01% |
| Serine SER (S) | 31 | 14.83% |
| Arginine ARG (R) | 3 | 1.44% |
| Threonine THR (T) | 19 | 9.09% |
| Tryptophan TRP (W) | 1 | 0.48% |
| Valine VAL (V) | 22 | 10.53% |
| Tyrosine TYR (Y) | 0 | 0% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 909 |
| Hydrogen | H | 1462 |
| Nitrogen | N | 240 |
| Oxygen | O | 288 |
| Sulphur | S | 4 |
| Formula | C909H1462N240O288S4 |
| Total Number of Atoms: | 2903 |
| Total number of positively charged residues (ARG + LYS): | 14 |
| Total number of negatively charged residues (ASP + GLU): | 11 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 5500 Absorption 0.1% (=1 g/l) 0.268, assuming all pairs of CYS residues form cystines Ext. coefficient 5500 Absorption 0.1% (=1 g/l) 0.268, assuming all CYS residues are reduced |
| Aromaticity: | 0.019 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 102.02 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [17.22, 42.11, 22.49] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 64.4976 |
| Grand average of hydropathicity (GRAVY): | -0.15 |