Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4501 |
| Number of amino acids: | 587 |
| Molecular Weight: | 65875.63 Da |
| Theoretical pI: | 7.14 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 36 | 6.13% |
| Cysteine CYS (C) | 7 | 1.19% |
| Glutamic Acid GLU (E) | 30 | 5.11% |
| Aspartic Acid ASP (D) | 21 | 3.58% |
| Glycine GLY (G) | 45 | 7.67% |
| Phynylalanine PHE (F) | 32 | 5.45% |
| Isoleucine ILE (I) | 37 | 6.3% |
| Histidine HIS (H) | 21 | 3.58% |
| Lysine LYS (K) | 30 | 5.11% |
| Methionine MET (M) | 16 | 2.73% |
| Leucine LEU (L) | 49 | 8.35% |
| Asparagine ASN (N) | 40 | 6.81% |
| Glutamine GLN (Q) | 15 | 2.56% |
| Proline PRO (P) | 53 | 9.03% |
| Serine SER (S) | 31 | 5.28% |
| Arginine ARG (R) | 20 | 3.41% |
| Threonine THR (T) | 30 | 5.11% |
| Tryptophan TRP (W) | 14 | 2.39% |
| Valine VAL (V) | 38 | 6.47% |
| Tyrosine TYR (Y) | 22 | 3.75% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3018 |
| Hydrogen | H | 4568 |
| Nitrogen | N | 788 |
| Oxygen | O | 828 |
| Sulphur | S | 23 |
| Formula | C3018H4568N788O828S23 |
| Total Number of Atoms: | 9225 |
| Total number of positively charged residues (ARG + LYS): | 50 |
| Total number of negatively charged residues (ASP + GLU): | 51 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 110155 Absorption 0.1% (=1 g/l) 1.672, assuming all pairs of CYS residues form cystines Ext. coefficient 109780 Absorption 0.1% (=1 g/l) 1.666, assuming all CYS residues are reduced |
| Aromaticity: | 0.116 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.20 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.71, 28.79, 22.32] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.0443 |
| Grand average of hydropathicity (GRAVY): | -0.20 |