Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4500 |
| Number of amino acids: | 630 |
| Molecular Weight: | 68959.53 Da |
| Theoretical pI: | 7.04 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 37 | 5.87% |
| Cysteine CYS (C) | 9 | 1.43% |
| Glutamic Acid GLU (E) | 25 | 3.97% |
| Aspartic Acid ASP (D) | 35 | 5.56% |
| Glycine GLY (G) | 64 | 10.16% |
| Phynylalanine PHE (F) | 36 | 5.71% |
| Isoleucine ILE (I) | 27 | 4.29% |
| Histidine HIS (H) | 16 | 2.54% |
| Lysine LYS (K) | 44 | 6.98% |
| Methionine MET (M) | 11 | 1.75% |
| Leucine LEU (L) | 32 | 5.08% |
| Asparagine ASN (N) | 58 | 9.21% |
| Glutamine GLN (Q) | 16 | 2.54% |
| Proline PRO (P) | 29 | 4.6% |
| Serine SER (S) | 54 | 8.57% |
| Arginine ARG (R) | 15 | 2.38% |
| Threonine THR (T) | 47 | 7.46% |
| Tryptophan TRP (W) | 6 | 0.95% |
| Valine VAL (V) | 38 | 6.03% |
| Tyrosine TYR (Y) | 31 | 4.92% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3056 |
| Hydrogen | H | 4625 |
| Nitrogen | N | 831 |
| Oxygen | O | 957 |
| Sulphur | S | 20 |
| Formula | C3056H4625N831O957S20 |
| Total Number of Atoms: | 9489 |
| Total number of positively charged residues (ARG + LYS): | 59 |
| Total number of negatively charged residues (ASP + GLU): | 60 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 79690 Absorption 0.1% (=1 g/l) 1.156, assuming all pairs of CYS residues form cystines Ext. coefficient 79190 Absorption 0.1% (=1 g/l) 1.148, assuming all CYS residues are reduced |
| Aromaticity: | 0.116 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 25.93 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.98, 32.54, 16.67] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 59.8889 |
| Grand average of hydropathicity (GRAVY): | -0.54 |