Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4498 |
| Number of amino acids: | 462 |
| Molecular Weight: | 50792.02 Da |
| Theoretical pI: | 6.76 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 31 | 6.71% |
| Cysteine CYS (C) | 4 | 0.87% |
| Glutamic Acid GLU (E) | 31 | 6.71% |
| Aspartic Acid ASP (D) | 24 | 5.19% |
| Glycine GLY (G) | 38 | 8.23% |
| Phynylalanine PHE (F) | 16 | 3.46% |
| Isoleucine ILE (I) | 25 | 5.41% |
| Histidine HIS (H) | 14 | 3.03% |
| Lysine LYS (K) | 25 | 5.41% |
| Methionine MET (M) | 8 | 1.73% |
| Leucine LEU (L) | 52 | 11.26% |
| Asparagine ASN (N) | 19 | 4.11% |
| Glutamine GLN (Q) | 13 | 2.81% |
| Proline PRO (P) | 31 | 6.71% |
| Serine SER (S) | 34 | 7.36% |
| Arginine ARG (R) | 28 | 6.06% |
| Threonine THR (T) | 23 | 4.98% |
| Tryptophan TRP (W) | 1 | 0.22% |
| Valine VAL (V) | 32 | 6.93% |
| Tyrosine TYR (Y) | 13 | 2.81% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2258 |
| Hydrogen | H | 3606 |
| Nitrogen | N | 632 |
| Oxygen | O | 675 |
| Sulphur | S | 12 |
| Formula | C2258H3606N632O675S12 |
| Total Number of Atoms: | 7183 |
| Total number of positively charged residues (ARG + LYS): | 53 |
| Total number of negatively charged residues (ASP + GLU): | 55 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 25120 Absorption 0.1% (=1 g/l) 0.495, assuming all pairs of CYS residues form cystines Ext. coefficient 24870 Absorption 0.1% (=1 g/l) 0.490, assuming all CYS residues are reduced |
| Aromaticity: | 0.065 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 48.78 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.09, 26.41, 26.41] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 91.7965 |
| Grand average of hydropathicity (GRAVY): | -0.28 |