Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4496 |
| Number of amino acids: | 480 |
| Molecular Weight: | 53608.04 Da |
| Theoretical pI: | 8.04 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 6.67% |
| Cysteine CYS (C) | 8 | 1.67% |
| Glutamic Acid GLU (E) | 21 | 4.38% |
| Aspartic Acid ASP (D) | 23 | 4.79% |
| Glycine GLY (G) | 35 | 7.29% |
| Phynylalanine PHE (F) | 25 | 5.21% |
| Isoleucine ILE (I) | 25 | 5.21% |
| Histidine HIS (H) | 11 | 2.29% |
| Lysine LYS (K) | 30 | 6.25% |
| Methionine MET (M) | 9 | 1.88% |
| Leucine LEU (L) | 41 | 8.54% |
| Asparagine ASN (N) | 25 | 5.21% |
| Glutamine GLN (Q) | 14 | 2.92% |
| Proline PRO (P) | 29 | 6.04% |
| Serine SER (S) | 46 | 9.58% |
| Arginine ARG (R) | 16 | 3.33% |
| Threonine THR (T) | 23 | 4.79% |
| Tryptophan TRP (W) | 12 | 2.5% |
| Valine VAL (V) | 32 | 6.67% |
| Tyrosine TYR (Y) | 23 | 4.79% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2439 |
| Hydrogen | H | 3701 |
| Nitrogen | N | 631 |
| Oxygen | O | 700 |
| Sulphur | S | 17 |
| Formula | C2439H3701N631O700S17 |
| Total Number of Atoms: | 7488 |
| Total number of positively charged residues (ARG + LYS): | 46 |
| Total number of negatively charged residues (ASP + GLU): | 44 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 100770 Absorption 0.1% (=1 g/l) 1.880, assuming all pairs of CYS residues form cystines Ext. coefficient 100270 Absorption 0.1% (=1 g/l) 1.870, assuming all CYS residues are reduced |
| Aromaticity: | 0.125 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 48.49 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.92, 28.12, 21.46] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.625 |
| Grand average of hydropathicity (GRAVY): | -0.21 |