Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4492 |
| Number of amino acids: | 482 |
| Molecular Weight: | 54358.82 Da |
| Theoretical pI: | 8.41 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 22 | 4.56% |
| Cysteine CYS (C) | 9 | 1.87% |
| Glutamic Acid GLU (E) | 19 | 3.94% |
| Aspartic Acid ASP (D) | 23 | 4.77% |
| Glycine GLY (G) | 37 | 7.68% |
| Phynylalanine PHE (F) | 25 | 5.19% |
| Isoleucine ILE (I) | 29 | 6.02% |
| Histidine HIS (H) | 13 | 2.7% |
| Lysine LYS (K) | 30 | 6.22% |
| Methionine MET (M) | 8 | 1.66% |
| Leucine LEU (L) | 41 | 8.51% |
| Asparagine ASN (N) | 31 | 6.43% |
| Glutamine GLN (Q) | 22 | 4.56% |
| Proline PRO (P) | 29 | 6.02% |
| Serine SER (S) | 34 | 7.05% |
| Arginine ARG (R) | 16 | 3.32% |
| Threonine THR (T) | 33 | 6.85% |
| Tryptophan TRP (W) | 10 | 2.07% |
| Valine VAL (V) | 28 | 5.81% |
| Tyrosine TYR (Y) | 23 | 4.77% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2463 |
| Hydrogen | H | 3751 |
| Nitrogen | N | 649 |
| Oxygen | O | 710 |
| Sulphur | S | 17 |
| Formula | C2463H3751N649O710S17 |
| Total Number of Atoms: | 7590 |
| Total number of positively charged residues (ARG + LYS): | 46 |
| Total number of negatively charged residues (ASP + GLU): | 42 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 89770 Absorption 0.1% (=1 g/l) 1.651, assuming all pairs of CYS residues form cystines Ext. coefficient 89270 Absorption 0.1% (=1 g/l) 1.642, assuming all CYS residues are reduced |
| Aromaticity: | 0.120 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.57 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.37, 27.18, 18.67] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 78.0498 |
| Grand average of hydropathicity (GRAVY): | -0.34 |