Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4489 |
| Number of amino acids: | 353 |
| Molecular Weight: | 38832.12 Da |
| Theoretical pI: | 7.73 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 28 | 7.93% |
| Cysteine CYS (C) | 9 | 2.55% |
| Glutamic Acid GLU (E) | 8 | 2.27% |
| Aspartic Acid ASP (D) | 22 | 6.23% |
| Glycine GLY (G) | 19 | 5.38% |
| Phynylalanine PHE (F) | 21 | 5.95% |
| Isoleucine ILE (I) | 15 | 4.25% |
| Histidine HIS (H) | 6 | 1.7% |
| Lysine LYS (K) | 7 | 1.98% |
| Methionine MET (M) | 7 | 1.98% |
| Leucine LEU (L) | 40 | 11.33% |
| Asparagine ASN (N) | 25 | 7.08% |
| Glutamine GLN (Q) | 13 | 3.68% |
| Proline PRO (P) | 18 | 5.1% |
| Serine SER (S) | 30 | 8.5% |
| Arginine ARG (R) | 24 | 6.8% |
| Threonine THR (T) | 31 | 8.78% |
| Tryptophan TRP (W) | 2 | 0.57% |
| Valine VAL (V) | 22 | 6.23% |
| Tyrosine TYR (Y) | 6 | 1.7% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1708 |
| Hydrogen | H | 2700 |
| Nitrogen | N | 484 |
| Oxygen | O | 519 |
| Sulphur | S | 16 |
| Formula | C1708H2700N484O519S16 |
| Total Number of Atoms: | 5427 |
| Total number of positively charged residues (ARG + LYS): | 31 |
| Total number of negatively charged residues (ASP + GLU): | 30 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 20440 Absorption 0.1% (=1 g/l) 0.526, assuming all pairs of CYS residues form cystines Ext. coefficient 19940 Absorption 0.1% (=1 g/l) 0.513, assuming all CYS residues are reduced |
| Aromaticity: | 0.082 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.86 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.03, 26.06, 23.51] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 86.7703 |
| Grand average of hydropathicity (GRAVY): | -0.08 |